Murrugarra, D. ., Veliz-Cuba, A. ., Aguilar, B. ., Arat, S. ., & Laubenbacher, R. . (2012). Modeling stochasticity and variability in gene regulatory networks. EURASIP Journal on Bioinformatics & Systems Biology, 2012(1), 5. https://doi.org/10.1186/1687-4153-2012-5 (Original work published 2012)

Murrugarra, D. ., Veliz-Cuba, A. ., Aguilar, B. ., & Laubenbacher, R. . (2016). Identification of control targets in Boolean molecular network models via computational algebra. BMC Systems Biology, 10(1), 94. https://doi.org/10.1186/s12918-016-0332-x (Original work published 2016)

Márquez-Zacarías, P. ., Pineau, R. ., Gómez, M. ., Veliz-Cuba, A. ., Murrugarra, D. ., Ratcliff, W. ., & Niklas, K. . (2021). Evolution of Cellular Differentiation: From Hypotheses to Models. Trends in Ecology & Evolution, 36(1), 49-60. https://doi.org/10.1016/j.tree.2020.07.013

, Smith, J. ., Cecil, R. ., Kabangu, M. ., Duerr, T. ., , … Murrugarra, D. . HDAC Inhibitor Titration of Transcription and Axolotl Tail Regeneration. Frontiers in Cell and Developmental Biology, 9, 767377. https://doi.org/10.3389/fcell.2021.767377 (Original work published 2021)